Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose transport system substrate-binding protein | SAMN05216248_101850 | Not Available | Positive | 865046 - 865969 | 32321.1 |
| ribose transport system atp-binding protein | SAMN05216248_101851 | Not Available | Positive | 866033 - 867541 | 55090.0 |
| ribose transport system permease protein | SAMN05216248_101852 | Not Available | Positive | 867507 - 868499 | 34249.2 |
| l-iditol 2-dehydrogenase | SAMN05216248_101853 | Not Available | Positive | 868528 - 869607 | 39256.5 |
| xylulokinase | SAMN05216248_101854 | Not Available | Positive | 869611 - 871143 | 55608.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216248_101855 | Not Available | Positive | 871284 - 872009 | 25025.2 |
| transcriptional regulator, laci family | SAMN05216248_101856 | Not Available | Negative | 872006 - 873010 | 36865.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05216248_101857 | Not Available | Negative | 873069 - 873932 | 32067.6 |
| hypothetical protein | SAMN05216248_101858 | Not Available | Positive | 873966 - 874577 | 21006.7 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05216248_101860 | Not Available | Negative | 874874 - 876277 | 49822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
