Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05216248_101840 | Not Available | Positive | 855742 - 856410 | 24021.0 |
| putative abc transport system permease protein | SAMN05216248_101841 | Not Available | Positive | 856469 - 858874 | 86300.8 |
| predicted secreted hydrolase | SAMN05216248_101842 | Not Available | Positive | 858864 - 859925 | 39039.7 |
| hypothetical protein | SAMN05216248_101843 | Not Available | Positive | 860063 - 860215 | 5665.76 |
| hypothetical protein | SAMN05216248_101844 | Not Available | Positive | 860266 - 860547 | 10335.4 |
| hypothetical protein | SAMN05216248_101845 | Not Available | Positive | 860544 - 860816 | 9840.03 |
| hypothetical protein | SAMN05216248_101846 | Not Available | Positive | 861007 - 861360 | 13949.3 |
| hypothetical protein | SAMN05216248_101847 | Not Available | Positive | 861486 - 862928 | 51351.9 |
| strictosidine synthase | SAMN05216248_101848 | Not Available | Negative | 862977 - 864077 | 39933.0 |
| fatty acid hydroxylase superfamily protein | SAMN05216248_101849 | Not Available | Negative | 864074 - 864751 | 26091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
