Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m60, enhancin and enhancin-like | SAMN05216248_101830 | Not Available | Positive | 844537 - 847089 | 94184.3 |
| putative hydrolases of hd superfamily | SAMN05216248_101831 | Not Available | Positive | 847239 - 847469 | 8352.82 |
| mcbb family protein | SAMN05216248_101832 | Not Available | Positive | 848339 - 849196 | 32718.6 |
| sagb-type dehydrogenase domain-containing protein | SAMN05216248_101833 | Not Available | Positive | 849193 - 849999 | 30795.6 |
| ycao-like family protein | SAMN05216248_101834 | Not Available | Positive | 849986 - 851179 | 44633.7 |
| abc-2 type transport system permease protein | SAMN05216248_101835 | Not Available | Positive | 851188 - 851931 | 27870.9 |
| abc-2 type transport system atp-binding protein | SAMN05216248_101836 | Not Available | Positive | 851931 - 852644 | 26156.4 |
| hypothetical protein | SAMN05216248_101837 | Not Available | Negative | 852833 - 852961 | 4412.38 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05216248_101838 | Not Available | Negative | 852961 - 854616 | 62108.4 |
| hypothetical protein | SAMN05216248_101839 | Not Available | Negative | 854791 - 855465 | 24572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
