Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236462 bp
Thymine Count
1236558 bp
Guanine Count
1883898 bp
Cytosine Count
1879585 bp
Genome Length
6239853 bp
Protein-coding Genes
5515 genes
Non-Coding Genes
242 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05216248_101810 | Not Available | Positive | 825992 - 826531 | 19479.7 |
| hypothetical protein | SAMN05216248_101811 | Not Available | Negative | 826504 - 827826 | 47494.4 |
| amino acid transporter | SAMN05216248_101812 | Not Available | Positive | 828044 - 829543 | 53084.4 |
| protein of unknown function | SAMN05216248_101813 | Not Available | Positive | 829506 - 830072 | 21193.2 |
| arac-type dna-binding protein | SAMN05216248_101814 | Not Available | Positive | 830259 - 831200 | 34743.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05216248_101815 | Not Available | Negative | 831206 - 831958 | 25832.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216248_101816 | Not Available | Negative | 831951 - 832751 | 27763.1 |
| molybdenum cofactor biosynthesis protein f | SAMN05216248_101817 | Not Available | Negative | 832744 - 833565 | 30648.8 |
| hypothetical protein | SAMN05216248_101818 | Not Available | Negative | 833579 - 833944 | 13294.7 |
| gamma-glutamylputrescine oxidase | SAMN05216248_101819 | Not Available | Negative | 834081 - 835379 | 47715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
