Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Synechococcales
Family
Synechococcaceae
Genus
Synechococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Synechococcales |
| Family | Synechococcaceae |
| Genus | Synechococcus |
| Species | Synechococcus sp. JA-3-3Ab |
| Strain | A-Prime |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Thermophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photosynthetic - Photoautotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
583006 bp
Thymine Count
583140 bp
Guanine Count
884334 bp
Cytosine Count
882286 bp
Genome Length
2932766 bp
Protein-coding Genes
2778 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CYA_RS03940 | Not Available | Negative | 851354 - 851761 | 14880.0 |
| hypothetical protein | CYA_RS15005 | Not Available | Positive | 851871 - 852020 | 5284.72 |
| duf2062 domain-containing protein | CYA_RS03945 | Not Available | Positive | 852267 - 852719 | 16857.9 |
| type i methionyl aminopeptidase | CYA_RS03950 | Not Available | Positive | 852908 - 853696 | 28591.2 |
| chloride channel protein | CYA_RS03955 | Not Available | Positive | 853703 - 855547 | 63966.0 |
| endonuclease iii domain-containing protein | CYA_RS03960 | Not Available | Negative | 855551 - 856339 | 28712.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CYA_RS03965 | Not Available | Negative | 856359 - 857447 | 38673.1 |
| photosynthesis system ii assembly factor ycf48 | CYA_RS03970 | Not Available | Negative | 857455 - 858459 | 36700.8 |
| rubredoxin | CYA_RS03975 | Not Available | Negative | 858459 - 858875 | 15407.7 |
| fha domain-containing protein | CYA_RS03980 | Not Available | Positive | 859234 - 859644 | 15288.8 |
Pathways
228 pathways
Health Effects
No health effects information available for this bacterium.



