Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Synechococcales
Family
Synechococcaceae
Genus
Synechococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Synechococcales |
| Family | Synechococcaceae |
| Genus | Synechococcus |
| Species | Synechococcus sp. JA-3-3Ab |
| Strain | A-Prime |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Thermophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photosynthetic - Photoautotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
583006 bp
Thymine Count
583140 bp
Guanine Count
884334 bp
Cytosine Count
882286 bp
Genome Length
2932766 bp
Protein-coding Genes
2778 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endonuclease cas1e | CYA_RS03415 | Not Available | Negative | 734001 - 734948 | 35209.2 |
| type i-e crispr-associated protein cas6/cse3/case | CYA_RS13975 | Not Available | Negative | 734975 - 735607 | 24253.5 |
| type i-e crispr-associated protein cas5/casd | CYA_RS03430 | Not Available | Negative | 735589 - 736212 | 23884.9 |
| type i-e crispr-associated protein cas7/cse4/casc | CYA_RS03435 | Not Available | Negative | 736216 - 737358 | 41320.6 |
| type i-e crispr-associated protein cse2/casb | CYA_RS03440 | Not Available | Negative | 737425 - 738024 | 23068.1 |
| type i-e crispr-associated protein cse1/casa | CYA_RS03445 | Not Available | Negative | 738036 - 739610 | 59862.6 |
| crispr-associated helicase/endonuclease cas3 | CYA_RS03450 | Not Available | Negative | 739627 - 742308 | 99414.1 |
| yafy family protein | CYA_RS03455 | Not Available | Negative | 742311 - 743162 | 33573.4 |
| hypothetical protein | CYA_RS03460 | Not Available | Positive | 743340 - 743990 | 24396.6 |
| laglidadg family homing endonuclease | CYA_RS13690 | Not Available | Positive | 744036 - 744644 | 23279.4 |
Pathways
228 pathways
Health Effects
No health effects information available for this bacterium.



