Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Synechococcales
Family
Synechococcaceae
Genus
Synechococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Synechococcales |
| Family | Synechococcaceae |
| Genus | Synechococcus |
| Species | Synechococcus sp. JA-3-3Ab |
| Strain | A-Prime |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Thermophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photosynthetic - Photoautotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
583006 bp
Thymine Count
583140 bp
Guanine Count
884334 bp
Cytosine Count
882286 bp
Genome Length
2932766 bp
Protein-coding Genes
2778 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | CYA_RS03095 | Not Available | Positive | 667502 - 668083 | 21960.5 |
| atp-dependent clp protease proteolytic subunit | CYA_RS03100 | Not Available | Positive | 668111 - 668722 | 22610.5 |
| hypothetical protein | CYA_RS03105 | Not Available | Positive | 668998 - 669264 | 9765.89 |
| chromophore lyase cpct/cpet | CYA_RS03110 | Not Available | Negative | 669298 - 669897 | 22664.7 |
| malic enzyme-like nad(p)-binding protein | CYA_RS03115 | Not Available | Positive | 670060 - 671454 | 48817.3 |
| duf1614 domain-containing protein | CYA_RS03120 | Not Available | Positive | 671834 - 672505 | 23250.4 |
| caspase family protein | CYA_RS03125 | Not Available | Negative | 672502 - 674634 | 76054.3 |
| cpbp family intramembrane glutamic endopeptidase | CYA_RS03130 | Not Available | Negative | 675283 - 676173 | 32579.5 |
| class i sam-dependent methyltransferase | CYA_RS03135 | Not Available | Negative | 676304 - 677014 | 27527.8 |
| sugar phosphate nucleotidyltransferase | CYA_RS03140 | Not Available | Negative | 677064 - 678011 | 34453.5 |
Pathways
228 pathways
Health Effects
No health effects information available for this bacterium.



