Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | SALA_RS03730 | P31459 | Positive | 750803 - 751702 | 31694.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | SALA_RS03735 | Q92RN8 | Positive | 751699 - 752343 | 22079.8 |
| gfo/idh/moca family protein | SALA_RS03740 | Q53TZ2 | Positive | 752340 - 753260 | 33586.4 |
| fadr/gntr family transcriptional regulator | SALA_RS03745 | Not Available | Positive | 753362 - 754051 | 25221.2 |
| smp-30/gluconolactonase/lre family protein | SALA_RS03750 | P0DOV6 | Positive | 754052 - 754906 | 31077.6 |
| abc transporter substrate-binding protein | SALA_RS03755 | Not Available | Negative | 754854 - 756215 | 49510.4 |
| carbohydrate abc transporter permease | SALA_RS03760 | O50501 | Negative | 756212 - 757048 | 30397.5 |
| carbohydrate abc transporter permease | SALA_RS03765 | O31519 | Negative | 757045 - 757917 | 32002.9 |
| abc transporter atp-binding protein | SALA_RS03770 | Q9Z3R9 | Negative | 757914 - 758960 | 37566.4 |
| phytanoyl-coa dioxygenase family protein | SALA_RS03775 | Not Available | Negative | 759069 - 759902 | 30868.7 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
