Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | SALA_RS01865 | Not Available | Negative | 383285 - 384829 | 55029.3 |
| hypothetical protein | SALA_RS17265 | Not Available | Positive | 385059 - 385229 | 5710.93 |
| sdr family oxidoreductase | SALA_RS01870 | Q82IY9 | Positive | 385276 - 386121 | 30113.8 |
| fumarate hydratase | SALA_RS01875 | P14407 | Negative | 386090 - 387613 | 54856.5 |
| merc domain-containing protein | SALA_RS01880 | Not Available | Positive | 387785 - 388240 | 15555.5 |
| fur family transcriptional regulator | SALA_RS01885 | Not Available | Positive | 388342 - 388806 | 16304.3 |
| hypothetical protein | SALA_RS01890 | Not Available | Positive | 388838 - 389599 | 26970.1 |
| type i methionyl aminopeptidase | SALA_RS01895 | Q9ZCD3 | Positive | 389645 - 390484 | 30246.3 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SALA_RS01900 | Q8GR64 | Positive | 390686 - 392869 | 77366.2 |
| 30s ribosomal protein s16 | SALA_RS17600 | Not Available | Negative | 393219 - 393374 | 5972.86 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
