Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase n-terminal domain-containing protein | SALA_RS01465 | Not Available | Negative | 292085 - 294085 | 72040.6 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | SALA_RS01470 | Not Available | Negative | 294188 - 295087 | 31492.1 |
| metal/formaldehyde-sensitive transcriptional repressor | SALA_RS01475 | P55757 | Negative | 295097 - 295369 | 9423.53 |
| sdr family nad(p)-dependent oxidoreductase | SALA_RS01480 | A0QYC2 | Positive | 295766 - 296542 | 26582.8 |
| enoyl-coa hydratase/isomerase family protein | SALA_RS01485 | P53526 | Positive | 296539 - 297327 | 28252.2 |
| arylsulfatase | SALA_RS01490 | P51691 | Positive | 297483 - 299231 | 63363.3 |
| formylglycine-generating enzyme family protein | SALA_RS01495 | I6Y8I5 | Negative | 299483 - 300412 | 33019.7 |
| tetr/acrr family transcriptional regulator | SALA_RS01500 | Not Available | Negative | 300409 - 301080 | 24913.1 |
| sulfatase-like hydrolase/transferase | SALA_RS01505 | Q571E4 | Positive | 301155 - 302786 | 59301.4 |
| substrate-binding domain-containing protein | SALA_RS01510 | P03024 | Positive | 302837 - 303844 | 35123.2 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
