Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS15110 | Not Available | Positive | 3113942 - 3114445 | 17074.3 |
| hypothetical protein | SALA_RS16545 | Not Available | Negative | 3114575 - 3115015 | 15012.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SALA_RS15120 | P0CAX1 | Positive | 3115117 - 3117693 | 93333.4 |
| septal ring lytic transglycosylase rlpa family protein | SALA_RS15125 | Q55752 | Positive | 3117794 - 3118198 | 14076.8 |
| duf4402 domain-containing protein | SALA_RS15130 | Not Available | Negative | 3118362 - 3118868 | 17547.2 |
| peptide-methionine (r)-s-oxide reductase msrb | SALA_RS15135 | Q3SJU1 | Positive | 3118996 - 3119403 | 14412.6 |
| transglycosylase domain-containing protein | SALA_RS15140 | O66874 | Positive | 3119456 - 3121633 | 77494.0 |
| m48 family metallopeptidase | SALA_RS15145 | Not Available | Negative | 3121640 - 3122371 | 26869.3 |
| ycgn family cysteine cluster protein | SALA_RS15150 | A5VA56 | Negative | 3122352 - 3122798 | 16594.6 |
| sco family protein | SALA_RS15155 | A1A4J8 | Negative | 3122801 - 3123448 | 22957.8 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
