Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp/nbp35 family atp-binding protein | SALA_RS11455 | P72190 | Positive | 2363390 - 2364367 | 33445.6 |
| coa-binding protein | SALA_RS11460 | P75874 | Positive | 2364367 - 2364789 | 14446.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | SALA_RS11465 | Not Available | Positive | 2364873 - 2367161 | 81149.5 |
| ferrochelatase | SALA_RS11470 | P57779 | Positive | 2367158 - 2368153 | 35775.6 |
| duf1963 domain-containing protein | SALA_RS11475 | Not Available | Positive | 2368246 - 2369745 | 53876.2 |
| acetoacetyl-coa reductase | SALA_RS11480 | P50205 | Positive | 2369834 - 2370556 | 25239.3 |
| ribbon-helix-helix domain-containing protein | SALA_RS11485 | Not Available | Positive | 2370719 - 2370967 | 9192.92 |
| rimk family alpha-l-glutamate ligase | SALA_RS11490 | Not Available | Negative | 2370952 - 2371809 | 30194.4 |
| nad-glutamate dehydrogenase domain-containing protein | SALA_RS11495 | Q9HZE0 | Negative | 2371949 - 2376667 | 169765.0 |
| hypothetical protein | SALA_RS11500 | Not Available | Negative | 2376832 - 2378184 | 47692.0 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
