Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | SALA_RS10760 | P16544 | Positive | 2221824 - 2222585 | 26277.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | SALA_RS10765 | Q1JUP4 | Negative | 2222777 - 2224210 | 50844.0 |
| tigr02466 family protein | SALA_RS10770 | Not Available | Negative | 2224365 - 2224964 | 22108.3 |
| smp-30/gluconolactonase/lre family protein | SALA_RS10775 | Not Available | Positive | 2225011 - 2225931 | 32516.4 |
| vit family protein | SALA_RS10780 | Q9P6J2 | Positive | 2225942 - 2226631 | 23260.8 |
| duf2855 family protein | SALA_RS10785 | Not Available | Positive | 2226719 - 2227825 | 39517.6 |
| had-ia family hydrolase | SALA_RS10790 | Q6JQN1 | Positive | 2227822 - 2228469 | 22894.4 |
| lysr family transcriptional regulator | SALA_RS10795 | Q81VJ1 | Negative | 2228568 - 2229461 | 31445.7 |
| coa transferase subunit a | SALA_RS10800 | B0RVK4 | Positive | 2229553 - 2230263 | 25582.9 |
| coa transferase subunit b | SALA_RS10805 | B0RVK3 | Positive | 2230263 - 2230898 | 22586.3 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
