Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS17500 | Not Available | Positive | 2185671 - 2185832 | 5407.51 |
| 30s ribosomal protein s16 | SALA_RS17505 | Not Available | Positive | 2185916 - 2186023 | 4040.9 |
| hypothetical protein | SALA_RS10580 | Not Available | Positive | 2186034 - 2186243 | 7158.55 |
| 2-hydroxychromene-2-carboxylate isomerase | SALA_RS10585 | Not Available | Negative | 2186256 - 2186903 | 24194.9 |
| marr family winged helix-turn-helix transcriptional regulator | SALA_RS10590 | Not Available | Positive | 2187030 - 2187476 | 16731.2 |
| hlyd family secretion protein | SALA_RS10595 | Q9RQ30 | Positive | 2187476 - 2188591 | 38884.2 |
| mdr family mfs transporter | SALA_RS10600 | Q9RQ29 | Positive | 2188781 - 2190370 | 57020.3 |
| metal-dependent hydrolase | SALA_RS10605 | Not Available | Negative | 2190457 - 2191347 | 34004.0 |
| tetr/acrr family transcriptional regulator | SALA_RS10610 | Not Available | Positive | 2191406 - 2192014 | 21170.5 |
| type ii toxin-antitoxin system rele/pare family toxin | SALA_RS10615 | Not Available | Positive | 2192226 - 2192606 | 13756.3 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
