Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | SALA_RS10440 | P74261 | Positive | 2162452 - 2163264 | 28866.8 |
| meta domain-containing protein | SALA_RS10445 | Not Available | Positive | 2163426 - 2164130 | 24189.9 |
| dna recombination protein rmuc | SALA_RS10450 | Q9REQ3 | Negative | 2164284 - 2165639 | 48842.0 |
| hypothetical protein | SALA_RS10455 | Q9I6M7 | Negative | 2165865 - 2166341 | 18289.0 |
| copper chaperone pcu(a)c | SALA_RS10460 | Not Available | Negative | 2166468 - 2167001 | 18331.3 |
| molecular chaperone dnak | SALA_RS10465 | A5V5P9 | Positive | 2167155 - 2169059 | 67988.7 |
| molecular chaperone dnaj | SALA_RS10470 | Q5NPS5 | Positive | 2169178 - 2170308 | 40660.0 |
| sigma-70 family rna polymerase sigma factor | SALA_RS10475 | L0TCG5 | Negative | 2170504 - 2171373 | 31477.0 |
| carboxymuconolactone decarboxylase family protein | SALA_RS10480 | Not Available | Negative | 2171373 - 2171828 | 16642.0 |
| doxx family protein | SALA_RS10485 | Not Available | Positive | 2171966 - 2172343 | 13394.6 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
