Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase hera-like domain-containing protein | SALA_RS10295 | P39342 | Negative | 2132342 - 2133937 | 57013.5 |
| sodium-translocating pyrophosphatase | SALA_RS10300 | O68460 | Negative | 2134080 - 2136194 | 71689.3 |
| thiamine-phosphate kinase | SALA_RS10305 | Q9A8J2 | Negative | 2136430 - 2137359 | 31739.2 |
| transcription antitermination factor nusb | SALA_RS10310 | Q1GRI6 | Negative | 2137543 - 2137992 | 16329.5 |
| histidinol dehydrogenase | SALA_RS10315 | Q9RH05 | Negative | 2138000 - 2139292 | 44638.9 |
| atp phosphoribosyltransferase | SALA_RS10320 | Q1GRI4 | Negative | 2139279 - 2139935 | 23206.1 |
| duf2332 domain-containing protein | SALA_RS10325 | Not Available | Positive | 2139974 - 2141053 | 38399.8 |
| hypothetical protein | SALA_RS10330 | Not Available | Negative | 2141120 - 2141542 | 14645.0 |
| trna 2-thiouridine(34) synthase mnma | SALA_RS10335 | Q1GRI1 | Negative | 2141597 - 2142745 | 41082.3 |
| hypothetical protein | SALA_RS10340 | Not Available | Positive | 2142878 - 2143258 | 13808.6 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
