Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan halogenase family protein | SALA_RS00920 | Q8KHZ8 | Positive | 188026 - 189534 | 55416.1 |
| alpha-amylase family glycosyl hydrolase | SALA_RS00925 | Q05884 | Positive | 189531 - 191333 | 64788.4 |
| alpha-amylase family glycosyl hydrolase | SALA_RS00930 | Q9Z3R8 | Positive | 191345 - 192988 | 60464.8 |
| glycoside hydrolase family 97 protein | SALA_RS00935 | G8JZS4 | Positive | 192991 - 195033 | 75356.0 |
| fdhf/ydep family oxidoreductase | SALA_RS00940 | Q8XAX1 | Positive | 195234 - 197504 | 82826.2 |
| molybdenum cofactor guanylyltransferase | SALA_RS00945 | Q2IYY0 | Negative | 197506 - 198018 | 17484.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | SALA_RS00950 | Q3BS67 | Negative | 198015 - 198818 | 27430.3 |
| glycerol-3-phosphate dehydrogenase | SALA_RS00955 | Not Available | Negative | 198870 - 200369 | 55195.5 |
| glucose-6-phosphate dehydrogenase | SALA_RS00960 | P21907 | Positive | 200600 - 202063 | 53633.5 |
| phosphogluconate dehydratase | SALA_RS00965 | P21909 | Positive | 202259 - 204100 | 64660.8 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
