Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | SALA_RS10245 | Not Available | Negative | 2122337 - 2123026 | 24883.5 |
| tryptophan--trna ligase | SALA_RS10250 | Q89W91 | Negative | 2123181 - 2124179 | 35687.9 |
| murein biosynthesis integral membrane protein murj | SALA_RS10255 | P56882 | Negative | 2124201 - 2125778 | 55269.1 |
| protein-export chaperone secb | SALA_RS10260 | Q1GRJ6 | Negative | 2125806 - 2126324 | 18522.7 |
| tim44/tima family putative adaptor protein | SALA_RS10265 | Not Available | Positive | 2126574 - 2127239 | 24431.6 |
| murein transglycosylase a | SALA_RS10270 | Q9KPQ4 | Positive | 2127244 - 2128566 | 45884.8 |
| smr/muts family protein | SALA_RS10275 | Not Available | Positive | 2128574 - 2129152 | 20453.8 |
| succinyl-diaminopimelate desuccinylase | SALA_RS10280 | Q1GRJ2 | Negative | 2129149 - 2130282 | 40051.3 |
| cupin domain-containing protein | SALA_RS10285 | Not Available | Positive | 2130379 - 2130846 | 17011.0 |
| cytochrome p450 | SALA_RS10290 | P33006 | Negative | 2131015 - 2132301 | 47663.2 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
