Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS10015 | Not Available | Negative | 2080429 - 2080683 | 8655.63 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | SALA_RS10020 | Q53560 | Negative | 2080695 - 2081747 | 36307.4 |
| lrp/asnc family transcriptional regulator | SALA_RS10025 | O07920 | Positive | 2081872 - 2082342 | 17762.4 |
| 30s ribosomal protein s16 | SALA_RS16820 | Not Available | Negative | 2082662 - 2083460 | 30023.6 |
| dipeptide epimerase | SALA_RS10040 | P51981 | Negative | 2083542 - 2084531 | 34558.3 |
| ykva family protein | SALA_RS10045 | Not Available | Positive | 2084556 - 2084951 | 14320.8 |
| prolyl oligopeptidase family protein | SALA_RS10050 | Q06903 | Positive | 2085053 - 2087212 | 78250.8 |
| gaf domain-containing protein | SALA_RS10055 | P76270 | Positive | 2087214 - 2087699 | 16827.0 |
| glycine zipper 2tm domain-containing protein | SALA_RS10060 | Not Available | Positive | 2088086 - 2088877 | 28315.2 |
| hypothetical protein | SALA_RS10065 | Not Available | Positive | 2089089 - 2089619 | 19803.3 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
