Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | SALA_RS09915 | Not Available | Negative | 2057358 - 2060030 | 99310.3 |
| rip metalloprotease rsep | SALA_RS09920 | Q8UFL7 | Negative | 2060102 - 2061235 | 40868.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SALA_RS09925 | Q9X5F2 | Negative | 2061228 - 2062391 | 40454.6 |
| phosphatidate cytidylyltransferase | SALA_RS09930 | Q8YHH2 | Negative | 2062393 - 2063058 | 22576.4 |
| polyprenyl diphosphate synthase | SALA_RS09935 | Q9X5F1 | Negative | 2063061 - 2063705 | 23751.4 |
| ribosome recycling factor | SALA_RS09940 | Q1GRQ3 | Negative | 2063871 - 2064425 | 20436.6 |
| ump kinase | SALA_RS09945 | Q1GRQ2 | Negative | 2064568 - 2065293 | 25567.2 |
| translation elongation factor ts | SALA_RS09950 | Q1GRQ1 | Negative | 2065409 - 2066335 | 31586.7 |
| 30s ribosomal protein s2 | SALA_RS09955 | Q1GRQ0 | Negative | 2066467 - 2067300 | 29609.2 |
| hypothetical protein | SALA_RS09960 | Not Available | Positive | 2067614 - 2067877 | 8895.1 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
