Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| femab family xrta/pep-cterm system-associated protein | SALA_RS09770 | Not Available | Negative | 2026032 - 2027075 | 37670.1 |
| xrta system polysaccharide deacetylase | SALA_RS09775 | Not Available | Negative | 2027096 - 2027956 | 31619.5 |
| xrta/pep-cterm system-associated atpase | SALA_RS09780 | P45754 | Negative | 2028002 - 2029246 | 45331.7 |
| hypothetical protein | SALA_RS09785 | Not Available | Negative | 2029269 - 2030975 | 59859.5 |
| p-loop ntpase | SALA_RS09790 | P71051 | Negative | 2030975 - 2031967 | 34333.7 |
| xrta system polysaccharide chain length determinant | SALA_RS09795 | Not Available | Negative | 2031982 - 2033511 | 54057.0 |
| xrta/pep-cterm system exopolysaccharide export protein | SALA_RS09800 | Not Available | Negative | 2033560 - 2034138 | 20839.3 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | SALA_RS09805 | Q2L4H3 | Negative | 2034388 - 2035617 | 41849.2 |
| acyl-coa ligase (amp-forming), exosortase a system-associated | SALA_RS09810 | Q70LM6 | Negative | 2035614 - 2037146 | 54234.1 |
| gnat family n-acetyltransferase | SALA_RS09815 | Not Available | Positive | 2037182 - 2038171 | 36000.5 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
