Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SALA_RS17580 | Not Available | Positive | 1993256 - 1995385 | 76249.4 |
| hypothetical protein | SALA_RS09625 | Not Available | Negative | 1995430 - 1995969 | 19202.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SALA_RS09630 | P72332 | Negative | 1996000 - 1996743 | 25176.4 |
| acp s-malonyltransferase | SALA_RS09635 | P0AAJ0 | Negative | 1996768 - 1997706 | 32382.0 |
| ld-carboxypeptidase | SALA_RS09640 | Not Available | Negative | 1997835 - 1998662 | 29549.3 |
| mur ligase family protein | SALA_RS09645 | Q2RK78 | Positive | 1998874 - 2000262 | 47934.9 |
| 30s ribosomal protein s6 | SALA_RS09650 | Q1GRW0 | Positive | 2000423 - 2000791 | 13905.6 |
| 30s ribosomal protein s18 | SALA_RS09655 | Q1GRV9 | Positive | 2000803 - 2001027 | 8555.73 |
| 50s ribosomal protein l9 | SALA_RS09660 | Q1GRV8 | Positive | 2001041 - 2001673 | 22600.5 |
| lysr family transcriptional regulator | SALA_RS09665 | P24734 | Negative | 2001751 - 2002629 | 31484.9 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
