Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase associated domain-containing protein | SALA_RS09320 | Not Available | Negative | 1930708 - 1931211 | 17071.6 |
| voc family protein | SALA_RS09325 | Not Available | Negative | 1931221 - 1931601 | 13382.8 |
| formyltetrahydrofolate deformylase | SALA_RS09330 | Q46339 | Negative | 1931717 - 1932589 | 32080.3 |
| voc family protein | SALA_RS09335 | Not Available | Negative | 1932591 - 1932977 | 13308.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | SALA_RS09340 | P72324 | Negative | 1932992 - 1934104 | 39317.6 |
| gnat family n-acetyltransferase | SALA_RS09345 | Not Available | Negative | 1934202 - 1934720 | 18658.4 |
| thioesterase family protein | SALA_RS09350 | Not Available | Negative | 1934968 - 1935360 | 14605.3 |
| threonine ammonia-lyase | SALA_RS09355 | Q74FW6 | Negative | 1935505 - 1936755 | 44719.1 |
| nad(p)-dependent oxidoreductase | SALA_RS09360 | O33730 | Positive | 1937250 - 1938128 | 30534.6 |
| amidohydrolase | SALA_RS09365 | Not Available | Positive | 1938125 - 1939789 | 60029.1 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
