Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metalloprotease | SALA_RS09130 | Not Available | Negative | 1890380 - 1891894 | 52599.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SALA_RS09135 | Q1GS64 | Negative | 1892029 - 1892976 | 34106.2 |
| tyrosine recombinase | SALA_RS09140 | Q2NB52 | Negative | 1892986 - 1893897 | 33439.4 |
| hypothetical protein | SALA_RS09145 | Not Available | Negative | 1893890 - 1895677 | 61241.6 |
| shikimate kinase | SALA_RS09150 | Q9A435 | Positive | 1895819 - 1896394 | 20966.4 |
| 3-dehydroquinate synthase | SALA_RS09155 | Q5NPY8 | Positive | 1896382 - 1897488 | 38387.1 |
| srpbcc family protein | SALA_RS09160 | Not Available | Negative | 1897539 - 1898003 | 16782.4 |
| helix-turn-helix transcriptional regulator | SALA_RS09165 | Not Available | Negative | 1897996 - 1898346 | 12732.3 |
| cation:proton antiporter | SALA_RS09170 | C4ZPX3 | Negative | 1898481 - 1900379 | 67018.8 |
| iron-sulfur cluster assembly scaffold protein | SALA_RS09175 | Not Available | Negative | 1900376 - 1900804 | 14896.7 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
