Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | SALA_RS08935 | Q1GSA2 | Positive | 1852025 - 1853131 | 38519.9 |
| phosphoribosylglycinamide formyltransferase | SALA_RS08940 | P21872 | Positive | 1853279 - 1854226 | 34050.8 |
| nucleoside-diphosphate kinase | SALA_RS08945 | Q1GSA0 | Negative | 1854284 - 1854706 | 15362.2 |
| dna polymerase iii subunit chi | SALA_RS08950 | Not Available | Negative | 1854793 - 1855245 | 16674.5 |
| leucyl aminopeptidase | SALA_RS08955 | Q9A7M9 | Negative | 1855377 - 1856822 | 50254.2 |
| lps-assembly protein lptd | SALA_RS08960 | Q39D34 | Positive | 1856955 - 1859258 | 85177.0 |
| long-chain-fatty-acid--coa ligase | SALA_RS08965 | Not Available | Negative | 1859454 - 1861019 | 55029.6 |
| hypothetical protein | SALA_RS08970 | Not Available | Positive | 1861278 - 1861526 | 8608.44 |
| phosphotransferase family protein | SALA_RS08975 | Not Available | Negative | 1861545 - 1862522 | 35165.3 |
| hypothetical protein | SALA_RS08980 | Not Available | Negative | 1862613 - 1863035 | 15223.4 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
