Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis-specific protein-glutamate methyltransferase cheb | SALA_RS08835 | Q9AAK0 | Negative | 1829693 - 1830805 | 38382.6 |
| response regulator | SALA_RS08840 | P45709 | Negative | 1830824 - 1831198 | 13933.7 |
| chemotaxis protein chew | SALA_RS08845 | Not Available | Negative | 1831275 - 1831712 | 15498.2 |
| chemotaxis protein chea | SALA_RS08850 | O25153 | Negative | 1831709 - 1834132 | 86249.9 |
| histidine phosphotransferase family protein | SALA_RS08855 | Q2YQA5 | Negative | 1834173 - 1834817 | 22801.7 |
| rlua family pseudouridine synthase | SALA_RS08860 | P50513 | Positive | 1834994 - 1835950 | 33840.1 |
| rna polymerase sigma factor rpoh | SALA_RS08865 | P50512 | Positive | 1836030 - 1836932 | 34031.8 |
| lyttr family dna-binding domain-containing protein | SALA_RS16430 | Not Available | Positive | 1836977 - 1837810 | 31097.9 |
| m23 family metallopeptidase | SALA_RS08875 | Not Available | Positive | 1837889 - 1838986 | 39376.0 |
| hypothetical protein | SALA_RS08880 | Not Available | Positive | 1839060 - 1839701 | 22270.2 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
