Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2062 domain-containing protein | SALA_RS08795 | Not Available | Negative | 1820660 - 1821325 | 24488.8 |
| ssra-binding protein smpb | SALA_RS08800 | Q1GSC9 | Negative | 1821322 - 1821807 | 18483.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SALA_RS08805 | Q1GSC8 | Negative | 1821946 - 1822821 | 30568.5 |
| lytic transglycosylase domain-containing protein | SALA_RS08810 | P44888 | Positive | 1822922 - 1824961 | 73310.9 |
| transcription elongation factor greb | SALA_RS08815 | Q9K0C5 | Positive | 1824969 - 1825451 | 17562.8 |
| caspase family protein | SALA_RS08820 | Not Available | Negative | 1825455 - 1827188 | 61273.1 |
| hypothetical protein | SALA_RS17115 | Not Available | Negative | 1827319 - 1827474 | 5499.78 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1827551 - 1827933 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | SALA_RS08825 | P75820 | Negative | 1828067 - 1828756 | 25664.6 |
| protein-glutamate o-methyltransferase cher | SALA_RS08830 | Q57508 | Negative | 1828824 - 1829696 | 32351.9 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
