Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | SALA_RS08655 | Q1GSF8 | Negative | 1791571 - 1792086 | 17416.1 |
| zf-tfiib domain-containing protein | SALA_RS08660 | Not Available | Positive | 1792558 - 1792812 | 9867.52 |
| yoak family protein | SALA_RS08665 | Not Available | Negative | 1792831 - 1793469 | 21295.4 |
| amino acid permease | SALA_RS08670 | O07576 | Negative | 1793509 - 1794906 | 48440.3 |
| gtpase obge | SALA_RS08675 | Q1GSF4 | Positive | 1795038 - 1796084 | 36731.4 |
| class i sam-dependent methyltransferase | SALA_RS08680 | Not Available | Negative | 1796119 - 1797180 | 38057.4 |
| dna replication/repair protein recf | SALA_RS08685 | A5VA37 | Negative | 1797330 - 1798439 | 38764.7 |
| hypothetical protein | SALA_RS17575 | Not Available | Positive | 1798692 - 1798820 | 4367.41 |
| pspc domain-containing protein | SALA_RS08690 | Not Available | Positive | 1798882 - 1799061 | 6426.16 |
| zinc-binding dehydrogenase | SALA_RS08695 | Not Available | Negative | 1799155 - 1800294 | 40056.4 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
