Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS08560 | Not Available | Negative | 1769763 - 1770773 | 34227.7 |
| radical sam/spasm domain-containing protein | SALA_RS08565 | Q8XMQ3 | Negative | 1770770 - 1772308 | 54938.1 |
| ripp maturation radical sam c-methyltransferase | SALA_RS08570 | Not Available | Negative | 1772305 - 1774206 | 71095.7 |
| hypothetical protein | SALA_RS08575 | Not Available | Negative | 1774222 - 1774794 | 19720.5 |
| utra domain-containing protein | SALA_RS08580 | Not Available | Negative | 1774937 - 1775617 | 24235.9 |
| formimidoylglutamate deiminase | SALA_RS08585 | Q9HU77 | Negative | 1775614 - 1776963 | 47624.3 |
| imidazolonepropionase | SALA_RS08590 | Q1GSH1 | Positive | 1776993 - 1778204 | 42586.1 |
| histidine ammonia-lyase | SALA_RS08595 | Q1GSH0 | Positive | 1778201 - 1779730 | 52151.8 |
| n-formylglutamate deformylase | SALA_RS08600 | O31201 | Positive | 1779730 - 1780533 | 29454.6 |
| urocanate hydratase | SALA_RS08605 | Q1GSG8 | Positive | 1780530 - 1782191 | 60334.0 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
