Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | SALA_RS08505 | P18396 | Negative | 1760195 - 1761652 | 53496.7 |
| cytochrome-c oxidase, cbb3-type subunit iii | SALA_RS08510 | Q3J015 | Negative | 1761639 - 1762562 | 32643.6 |
| cbb3-type cytochrome c oxidase subunit 3 | SALA_RS08515 | Not Available | Negative | 1762555 - 1762713 | 6167.4 |
| cytochrome-c oxidase, cbb3-type subunit ii | SALA_RS08520 | Not Available | Negative | 1762710 - 1763474 | 28499.8 |
| cytochrome-c oxidase, cbb3-type subunit i | SALA_RS08525 | Q05572 | Negative | 1763487 - 1765145 | 61770.3 |
| ompw family protein | SALA_RS08530 | Not Available | Positive | 1765313 - 1765984 | 23611.4 |
| crp/fnr family transcriptional regulator | SALA_RS08535 | P51007 | Negative | 1765994 - 1766686 | 25233.6 |
| universal stress protein | SALA_RS08540 | Not Available | Negative | 1766872 - 1767681 | 28451.5 |
| serine protease | SALA_RS08545 | Not Available | Negative | 1767810 - 1768754 | 34746.4 |
| jmjc domain-containing protein | SALA_RS08550 | Not Available | Negative | 1768754 - 1769770 | 35850.1 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
