Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf817 domain-containing protein | SALA_RS08360 | O34535 | Positive | 1726873 - 1727730 | 32646.1 |
| xaa-pro peptidase family protein | SALA_RS08365 | Q9UUD8 | Negative | 1727824 - 1729068 | 44199.0 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | SALA_RS08370 | P40407 | Negative | 1729080 - 1730282 | 44368.9 |
| domon-like domain-containing protein | SALA_RS08375 | Not Available | Negative | 1730285 - 1730851 | 20784.0 |
| giy-yig nuclease family protein | SALA_RS08380 | A3CLU1 | Negative | 1730852 - 1731169 | 11787.9 |
| tyrosine--trna ligase | SALA_RS08385 | Q2G6I4 | Positive | 1731262 - 1732488 | 44840.0 |
| pilz domain-containing protein | SALA_RS08390 | Not Available | Positive | 1732562 - 1732903 | 12592.5 |
| atp-dependent dna helicase recg | SALA_RS08395 | P43809 | Negative | 1732973 - 1735039 | 74853.9 |
| succinate dehydrogenase assembly factor 2 | SALA_RS08400 | Not Available | Positive | 1735286 - 1735546 | 9952.88 |
| transcription-repair coupling factor | SALA_RS08405 | Q1RI82 | Positive | 1735543 - 1739127 | 129689.0 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
