Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | SALA_RS08260 | P42251 | Positive | 1703813 - 1705378 | 58445.2 |
| dna mismatch repair endonuclease mutl | SALA_RS08265 | Q1GSN3 | Negative | 1705394 - 1707205 | 64192.4 |
| rod shape-determining protein | SALA_RS08270 | Not Available | Positive | 1707402 - 1708448 | 36739.4 |
| rod shape-determining protein mrec | SALA_RS08275 | Q70AN6 | Positive | 1708466 - 1709368 | 31219.8 |
| hypothetical protein | SALA_RS08280 | Not Available | Positive | 1709365 - 1709886 | 19101.1 |
| penicillin-binding protein 2 | SALA_RS08285 | P0AD67 | Positive | 1709897 - 1711807 | 69527.1 |
| rod shape-determining protein roda | SALA_RS08290 | P0ABG8 | Positive | 1711804 - 1712910 | 39718.9 |
| Trna-lys | Not Available | Not Available | Positive | 1713023 - 1713098 | Not Available |
| acyl-coa dehydrogenase family protein | SALA_RS08300 | Not Available | Negative | 1713547 - 1714770 | 43936.1 |
| acyl-coa dehydrogenase family protein | SALA_RS08305 | Not Available | Negative | 1714784 - 1715875 | 38494.9 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
