Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | SALA_RS08215 | Not Available | Positive | 1695860 - 1696831 | 34737.6 |
| trab/gumn family protein | SALA_RS08220 | Not Available | Positive | 1696828 - 1697727 | 32029.6 |
| 50s ribosomal protein l25/general stress protein ctc | SALA_RS08225 | Q1GSP2 | Positive | 1697878 - 1698516 | 22965.4 |
| aminoacyl-trna hydrolase | SALA_RS08230 | Q1GSP1 | Positive | 1698583 - 1699152 | 20820.2 |
| sdr family oxidoreductase | SALA_RS08235 | Q9NYR8 | Positive | 1699270 - 1700259 | 34243.4 |
| cap domain-containing protein | SALA_RS08240 | Not Available | Negative | 1700273 - 1700926 | 23730.4 |
| redox-regulated atpase ychf | SALA_RS08245 | P44681 | Positive | 1701043 - 1702140 | 39055.6 |
| 30s ribosomal protein s16 | SALA_RS16765 | Not Available | Positive | 1702201 - 1702499 | 10936.2 |
| merr family dna-binding protein | SALA_RS08250 | Not Available | Negative | 1702552 - 1702953 | 14299.2 |
| glutaredoxin family protein | SALA_RS08255 | Not Available | Positive | 1702995 - 1703732 | 27291.8 |
Pathways
1029 pathways
Health Effects
No health effects information available for this bacterium.
