Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | SALA_RS08115 | C8WEG0 | Positive | 1675663 - 1677606 | 71236.5 |
| hypothetical protein | SALA_RS08120 | Not Available | Positive | 1677668 - 1678054 | 13941.1 |
| duf11 domain-containing protein | SALA_RS16760 | Not Available | Positive | 1678094 - 1678582 | 17069.3 |
| duf3800 domain-containing protein | SALA_RS08130 | Not Available | Positive | 1678599 - 1679204 | 21692.3 |
| dna-directed rna polymerase subunit omega | SALA_RS08135 | Q1GSQ7 | Negative | 1679430 - 1679774 | 12317.4 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | SALA_RS08140 | C5BDA3 | Positive | 1679910 - 1681100 | 43870.9 |
| class i sam-dependent methyltransferase | SALA_RS08145 | Not Available | Negative | 1681104 - 1681742 | 23828.8 |
| mfs transporter | SALA_RS08150 | Not Available | Positive | 1681887 - 1683209 | 46370.1 |
| cdc48 family aaa atpase | SALA_RS08155 | O28972 | Negative | 1683270 - 1685591 | 84101.2 |
| lysr substrate-binding domain-containing protein | SALA_RS08160 | P52659 | Positive | 1685734 - 1686612 | 32823.8 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
