Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | SALA_RS08070 | P58600 | Positive | 1665977 - 1667050 | 38472.3 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SALA_RS08075 | P58591 | Positive | 1667037 - 1668332 | 46237.9 |
| class i mannose-6-phosphate isomerase | SALA_RS08080 | O05511 | Positive | 1668378 - 1669184 | 28898.2 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | SALA_RS08085 | P0C7J3 | Positive | 1669207 - 1670280 | 37600.0 |
| atp-dependent protease subunit hslv | SALA_RS08090 | Q5NQY4 | Positive | 1670334 - 1670900 | 20201.3 |
| atp-dependent protease atpase subunit hslu | SALA_RS08095 | Q11CL4 | Positive | 1670905 - 1672206 | 47408.0 |
| 30s ribosomal protein s16 | SALA_RS17630 | Not Available | Negative | 1672203 - 1672462 | 9319.4 |
| helix-turn-helix domain-containing protein | SALA_RS08100 | Not Available | Positive | 1672711 - 1673568 | 30192.4 |
| tetratricopeptide repeat protein | SALA_RS08105 | Not Available | Positive | 1673683 - 1674624 | 33542.8 |
| trna lysidine(34) synthetase tils | SALA_RS08110 | Q2GC97 | Positive | 1674578 - 1675582 | 36397.8 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
