Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | SALA_RS07970 | O32268 | Positive | 1642347 - 1643105 | 28655.3 |
| phytanoyl-coa dioxygenase family protein | SALA_RS07975 | Not Available | Negative | 1643120 - 1644007 | 33656.5 |
| lipopolysaccharide biosynthesis protein | SALA_RS07980 | Not Available | Negative | 1644054 - 1645562 | 53400.0 |
| degt/dnrj/eryc1/strs family aminotransferase | SALA_RS07985 | Q795J3 | Negative | 1645575 - 1647182 | 57850.1 |
| acetyltransferase | SALA_RS07990 | Not Available | Negative | 1647074 - 1647727 | 22763.5 |
| udp-n-acetylglucosamine 2-epimerase | SALA_RS07995 | Q5ZXH8 | Negative | 1647738 - 1648880 | 41078.4 |
| n-acetylneuraminate synthase | SALA_RS08000 | Q5ZXH9 | Negative | 1648877 - 1649929 | 37379.7 |
| sdr family oxidoreductase | SALA_RS08005 | Q9X248 | Negative | 1649923 - 1650720 | 28229.8 |
| cytidylyltransferase domain-containing protein | SALA_RS08010 | Q45982 | Negative | 1650717 - 1651409 | 25293.4 |
| gfo/idh/moca family protein | SALA_RS08015 | Not Available | Negative | 1651406 - 1652407 | 36516.7 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
