Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SALA_RS07870 | P72736 | Positive | 1619140 - 1619661 | 18887.8 |
| Trna-lys | Not Available | Not Available | Positive | 1619704 - 1619779 | Not Available |
| nad-dependent epimerase/dehydratase family protein | SALA_RS07880 | P39858 | Positive | 1619856 - 1620863 | 36824.9 |
| nrsf family protein | SALA_RS07885 | Not Available | Negative | 1620881 - 1621138 | 9187.55 |
| sigma factor-like helix-turn-helix dna-binding protein | SALA_RS07890 | Not Available | Negative | 1621163 - 1621429 | 9571.66 |
| dna-binding domain-containing protein | SALA_RS07895 | Not Available | Negative | 1621504 - 1622208 | 24219.6 |
| duf692 domain-containing protein | SALA_RS07900 | B0SUL0 | Negative | 1622201 - 1623061 | 31214.8 |
| duf2282 domain-containing protein | SALA_RS07905 | Not Available | Negative | 1623066 - 1623371 | 9950.95 |
| udp-glucose 4-epimerase gale | SALA_RS07910 | P55180 | Positive | 1623680 - 1624696 | 36368.2 |
| tmem165/gdt1 family protein | SALA_RS07915 | A0A0H3AJF5 | Negative | 1624715 - 1625287 | 20094.0 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
