Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis factor | SALA_RS07675 | Not Available | Negative | 1580638 - 1581312 | 23076.6 |
| cytochrome c-type biogenesis protein | SALA_RS07680 | P45405 | Negative | 1581309 - 1581740 | 15625.8 |
| dsbe family thiol:disulfide interchange protein | SALA_RS07685 | Q9Z645 | Negative | 1581737 - 1582267 | 19029.3 |
| heme lyase ccmf/nrfe family subunit | SALA_RS07690 | P45404 | Negative | 1582264 - 1584234 | 69973.1 |
| cytochrome c maturation protein ccme | SALA_RS07695 | Q1GSZ2 | Negative | 1584368 - 1584805 | 15163.5 |
| hypothetical protein | SALA_RS17320 | Not Available | Negative | 1584802 - 1584957 | 5557.74 |
| heme abc transporter permease ccmc | SALA_RS07700 | P30962 | Negative | 1584962 - 1585693 | 26144.4 |
| yban family protein | SALA_RS07705 | P0AAR6 | Negative | 1585763 - 1586116 | 12711.9 |
| glu/leu/phe/val dehydrogenase | SALA_RS07710 | Q60030 | Negative | 1586256 - 1587305 | 36245.3 |
| Trna-his | Not Available | Not Available | Positive | 1587403 - 1587479 | Not Available |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
