Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SALA_RS07625 | Not Available | Negative | 1565921 - 1567228 | 45545.8 |
| surf1 family protein | SALA_RS07630 | Not Available | Negative | 1567228 - 1567929 | 25328.4 |
| cytochrome o ubiquinol oxidase subunit iv | SALA_RS07635 | P0ABJ7 | Negative | 1567926 - 1568312 | 14033.7 |
| cytochrome o ubiquinol oxidase subunit iii | SALA_RS07640 | Q9WWR3 | Negative | 1568309 - 1568935 | 23230.8 |
| cytochrome o ubiquinol oxidase subunit i | SALA_RS07645 | P0ABJ0 | Negative | 1568940 - 1570958 | 74560.4 |
| ubiquinol oxidase subunit ii | SALA_RS07650 | Q9WWR1 | Negative | 1570980 - 1572077 | 39910.4 |
| mfs transporter | SALA_RS07655 | P37643 | Positive | 1572460 - 1573788 | 47208.8 |
| mfs transporter | SALA_RS07660 | O34718 | Positive | 1574024 - 1575583 | 54787.4 |
| glycoside hydrolase family 3 protein | SALA_RS07665 | A7LXU3 | Negative | 1575805 - 1578285 | 86899.8 |
| potassium transporter kup | SALA_RS07670 | Q1GSZ7 | Negative | 1578637 - 1580598 | 70745.9 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
