Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d(cmp) kinase | SALA_RS07575 | A7IEB7 | Positive | 1556947 - 1557576 | 22528.6 |
| 30s ribosomal protein s1 | SALA_RS07580 | P14129 | Positive | 1557849 - 1559561 | 61726.6 |
| integration host factor subunit beta | SALA_RS07585 | A3PPV4 | Positive | 1559770 - 1560048 | 10414.4 |
| abc transporter permease | SALA_RS07590 | P0AFN8 | Negative | 1560148 - 1560915 | 28265.6 |
| abc transporter atp-binding protein | SALA_RS07595 | Not Available | Negative | 1560912 - 1561859 | 34444.8 |
| Trna-leu | Not Available | Not Available | Positive | 1561950 - 1562036 | Not Available |
| gnat family n-acetyltransferase | SALA_RS07605 | Not Available | Negative | 1562062 - 1562994 | 33911.9 |
| abc transporter substrate-binding protein | SALA_RS07610 | Not Available | Positive | 1563081 - 1564586 | 53955.7 |
| duf4112 domain-containing protein | SALA_RS07615 | Not Available | Positive | 1564893 - 1565315 | 15466.1 |
| response regulator transcription factor | SALA_RS07620 | P42508 | Negative | 1565391 - 1565924 | 19541.4 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
