Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | SALA_RS07525 | Q1GT24 | Negative | 1542641 - 1546924 | 158104.0 |
| dna-directed rna polymerase subunit beta | SALA_RS07530 | Q1GT23 | Negative | 1546979 - 1551157 | 154124.0 |
| enoyl-coa hydratase-related protein | SALA_RS07535 | P24162 | Positive | 1551452 - 1552255 | 27971.9 |
| hd domain-containing protein | SALA_RS07540 | Not Available | Negative | 1552390 - 1552992 | 23176.2 |
| hypothetical protein | SALA_RS07545 | Not Available | Negative | 1553061 - 1553771 | 25360.7 |
| hypothetical protein | SALA_RS07550 | Not Available | Negative | 1553755 - 1554312 | 19188.7 |
| rrf2 family transcriptional regulator | SALA_RS07555 | Not Available | Positive | 1554464 - 1554907 | 16348.8 |
| Trna-ala | Not Available | Not Available | Positive | 1554964 - 1555039 | Not Available |
| tigr02300 family protein | SALA_RS07565 | Not Available | Negative | 1555158 - 1555484 | 11821.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SALA_RS07570 | Q1GT16 | Positive | 1555610 - 1556950 | 45959.9 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
