Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | SALA_RS07480 | Q0AC82 | Positive | 1535730 - 1537070 | 48002.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SALA_RS07485 | Q5NMX3 | Positive | 1537070 - 1538089 | 35269.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | SALA_RS07490 | Q1GT31 | Positive | 1538086 - 1538925 | 30097.7 |
| hypothetical protein | SALA_RS07495 | Not Available | Negative | 1539234 - 1539509 | 9872.82 |
| cold-shock protein | SALA_RS07500 | P55390 | Positive | 1539682 - 1539888 | 7315.49 |
| translation initiation factor if-1 | SALA_RS07505 | Q2G552 | Positive | 1539891 - 1540148 | 9669.77 |
| hypothetical protein | SALA_RS17105 | Not Available | Positive | 1540186 - 1540341 | 5744.3 |
| hypothetical protein | SALA_RS07510 | Not Available | Positive | 1540387 - 1540581 | 7135.47 |
| rna polymerase sigma factor | SALA_RS07515 | Q52997 | Negative | 1540612 - 1541868 | 44905.4 |
| 30s ribosomal protein s16 | SALA_RS07520 | Not Available | Negative | 1542004 - 1542363 | 13482.1 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
