Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SALA_RS07385 | P13633 | Positive | 1510160 - 1511968 | 64280.1 |
| sigma-54 dependent transcriptional regulator | SALA_RS07390 | P13632 | Positive | 1511965 - 1513302 | 48480.5 |
| dipeptidase | SALA_RS07395 | Q6Q886 | Negative | 1513392 - 1514570 | 42763.2 |
| serine hydrolase | SALA_RS07400 | Q6G6M9 | Negative | 1514567 - 1516138 | 57901.1 |
| membrane protein | SALA_RS07405 | Not Available | Negative | 1516135 - 1517271 | 40142.1 |
| duf1611 domain-containing protein | SALA_RS07410 | Not Available | Negative | 1517268 - 1518308 | 35808.1 |
| tonb-dependent receptor | SALA_RS07415 | Not Available | Negative | 1518329 - 1520530 | 78227.3 |
| dipeptide epimerase | SALA_RS07420 | Not Available | Negative | 1521021 - 1522028 | 35773.0 |
| serine hydrolase | SALA_RS07425 | O31773 | Negative | 1522028 - 1524001 | 71194.9 |
| helix-turn-helix domain-containing protein | SALA_RS07430 | Not Available | Positive | 1524144 - 1524764 | 23136.6 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
