Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SALA_RS07340 | Not Available | Negative | 1494518 - 1495162 | 23960.3 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS07345 | P24180 | Positive | 1495276 - 1496406 | 39942.1 |
| multidrug efflux rnd transporter permease subunit | SALA_RS07350 | P31224 | Positive | 1496413 - 1499577 | 113323.0 |
| efflux transporter outer membrane subunit | SALA_RS07355 | O31101 | Positive | 1499570 - 1500985 | 50353.8 |
| dna alkylation repair protein | SALA_RS07360 | O07541 | Positive | 1500982 - 1502088 | 39800.6 |
| hypothetical protein | SALA_RS17625 | Not Available | Negative | 1502085 - 1502342 | 8997.09 |
| transglycosylase domain-containing protein | SALA_RS07365 | P70997 | Negative | 1502354 - 1504420 | 74753.6 |
| duf4886 domain-containing protein | SALA_RS07370 | Not Available | Negative | 1504478 - 1505389 | 32520.0 |
| tonb-dependent siderophore receptor | SALA_RS07375 | Not Available | Negative | 1505446 - 1508568 | 112717.0 |
| dicarboxylate/amino acid:cation symporter | SALA_RS07380 | Q1GT53 | Negative | 1508600 - 1509919 | 45374.6 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
