Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | SALA_RS07290 | Q0C000 | Positive | 1485902 - 1486342 | 15730.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SALA_RS07295 | P0ABE0 | Positive | 1486410 - 1486889 | 16244.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | SALA_RS07300 | P43873 | Positive | 1486896 - 1488260 | 49593.7 |
| l,d-transpeptidase family protein | SALA_RS07305 | Not Available | Positive | 1488423 - 1489781 | 48251.9 |
| 50s ribosomal protein l1 | SALA_RS07310 | Q1GT68 | Negative | 1489863 - 1490561 | 24285.8 |
| 50s ribosomal protein l11 | SALA_RS07315 | Q1GT67 | Negative | 1490564 - 1490995 | 15010.3 |
| acyl-coa thioesterase ii | SALA_RS07320 | P0AGG3 | Negative | 1491180 - 1492124 | 34648.1 |
| transcription termination/antitermination protein nusg | SALA_RS07325 | Q8DD25 | Negative | 1492186 - 1492722 | 19932.8 |
| preprotein translocase subunit sece | SALA_RS07330 | Not Available | Negative | 1492758 - 1492955 | 7267.07 |
| mfs transporter | SALA_RS07335 | Not Available | Negative | 1493113 - 1494459 | 47933.3 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
