Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS07140 | Not Available | Positive | 1462476 - 1462727 | 10178.7 |
| holo-acp synthase | SALA_RS07145 | Q1GT99 | Positive | 1462724 - 1463125 | 14410.4 |
| signal peptidase i | SALA_RS07150 | Q8L2J7 | Positive | 1463133 - 1463969 | 30333.6 |
| ai-2e family transporter | SALA_RS07155 | Not Available | Positive | 1463987 - 1465096 | 38574.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SALA_RS07160 | P65765 | Negative | 1465186 - 1465725 | 19239.5 |
| amidohydrolase family protein | SALA_RS07165 | G3XP38 | Positive | 1465894 - 1467165 | 43670.3 |
| atp-dependent dna helicase | SALA_RS07170 | P64315 | Positive | 1467225 - 1469960 | 98025.8 |
| histidine phosphatase family protein | SALA_RS07175 | Not Available | Positive | 1470017 - 1470568 | 20431.4 |
| merr family transcriptional regulator | SALA_RS07180 | P30791 | Negative | 1470688 - 1471080 | 14036.9 |
| integration host factor subunit alpha | SALA_RS07185 | Q1GT91 | Negative | 1471095 - 1471388 | 10465.8 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
