Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1343474 - 1343549 | Not Available |
| polysaccharide deacetylase family protein | SALA_RS06505 | Not Available | Negative | 1343619 - 1344641 | 37287.4 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | SALA_RS06510 | Not Available | Negative | 1344670 - 1346292 | 57807.0 |
| lrp/asnc family transcriptional regulator | SALA_RS06515 | P56901 | Positive | 1346471 - 1346944 | 17216.9 |
| tetratricopeptide repeat protein | SALA_RS06520 | Not Available | Negative | 1347013 - 1348293 | 44566.1 |
| hypothetical protein | SALA_RS06525 | Not Available | Negative | 1348456 - 1348752 | 10478.6 |
| hypothetical protein | SALA_RS06530 | Not Available | Positive | 1348822 - 1351185 | 82655.4 |
| duf1467 family protein | SALA_RS06535 | Not Available | Negative | 1351474 - 1351734 | 9583.54 |
| ribonuclease j | SALA_RS06540 | M4MR97 | Negative | 1351745 - 1353379 | 58356.2 |
| type iii pantothenate kinase | SALA_RS06545 | Q1GTL4 | Negative | 1353376 - 1354161 | 28094.2 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
