Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SALA_RS06455 | Q1GTN0 | Positive | 1336018 - 1337196 | 40699.8 |
| cina family protein | SALA_RS06460 | P0A6G4 | Positive | 1337201 - 1337758 | 19196.6 |
| type ii toxin-antitoxin system rata family toxin | SALA_RS06465 | A5F376 | Negative | 1337701 - 1338180 | 18007.4 |
| lipoyl synthase | SALA_RS06470 | Q1GTM7 | Negative | 1338188 - 1339123 | 34502.4 |
| carbonic anhydrase | SALA_RS06475 | P42737 | Positive | 1339186 - 1339827 | 23229.6 |
| paai family thioesterase | SALA_RS06480 | Not Available | Negative | 1339832 - 1340275 | 15565.9 |
| energy-dependent translational throttle protein etta | SALA_RS06485 | P45127 | Negative | 1340281 - 1341960 | 62182.0 |
| hypothetical protein | SALA_RS16725 | Not Available | Positive | 1342399 - 1342668 | 8014.02 |
| Trna-pro | Not Available | Not Available | Positive | 1342805 - 1342881 | Not Available |
| hypothetical protein | SALA_RS17565 | Not Available | Negative | 1342899 - 1343024 | 4661.77 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
