Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | SALA_RS06055 | P0DPE4 | Negative | 1241820 - 1243028 | 44598.4 |
| threonine/serine dehydratase | SALA_RS06060 | A4F2N8 | Positive | 1243095 - 1244096 | 34688.9 |
| hypothetical protein | SALA_RS06065 | Not Available | Positive | 1244143 - 1244577 | 15367.9 |
| ycei family protein | SALA_RS06070 | Not Available | Negative | 1244700 - 1245965 | 45300.2 |
| nitroreductase | SALA_RS06075 | Q6DLR9 | Negative | 1246052 - 1246741 | 25164.1 |
| 5-aminolevulinate synthase | SALA_RS06080 | P43089 | Negative | 1246738 - 1247958 | 44374.0 |
| glutamate racemase | SALA_RS06085 | Q1GTU9 | Negative | 1248095 - 1248901 | 27812.8 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | SALA_RS06090 | Q1GMR9 | Positive | 1249061 - 1249663 | 20612.8 |
| dna-processing protein dpra | SALA_RS06095 | Q8DPI7 | Positive | 1249660 - 1250742 | 38028.9 |
| hypothetical protein | SALA_RS06100 | Not Available | Positive | 1250852 - 1251085 | 8662.3 |
Pathways
1158 pathways
Health Effects
No health effects information available for this bacterium.
