Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage tail assembly chaperone | SALA_RS10135 | Not Available | - | 2104697 - 2104900 | 7091.4 |
| gene transfer agent family protein | SALA_RS10140 | Not Available | - | 2104902 - 2105210 | 10642.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SALA_RS10145 | Not Available | - | 2105225 - 2105632 | 14232.6 |
| hypothetical protein | SALA_RS10150 | Not Available | + | 2105680 - 2106015 | 12419.6 |
| duf3168 domain-containing protein | SALA_RS10155 | Not Available | - | 2106033 - 2106425 | 13654.6 |
| hypothetical protein | SALA_RS10160 | Not Available | - | 2106422 - 2106970 | 18836.8 |
| hypothetical protein | SALA_RS10165 | Not Available | - | 2106967 - 2107248 | 10056.9 |
| hypothetical protein | SALA_RS17135 | Not Available | - | 2107272 - 2107427 | 5317.4 |
| Putative tail fiber protein | SALA_RS10170 | P13390 | - | 2107424 - 2108917 | 51736.4 |
| Major capsid protein precursor | SALA_RS10175 | Not Available | - | 2109026 - 2110168 | 39868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.